APPLICATIONS OF TECHNOLOGY: High Performance Computing (HPC) Big Data processing and analysis Processor manufacturers Memory module manufacturers ADVANTAGES: Maximizes memory throughput Reduces application execution time by up to approximately 40% 2.2x lower memory power consumption ABSTRACT: Berkeley Lab scientists John Shalf and Georgios … [Read more...] about Collective Memory Transfers for Multi-Core Processors 2013-086
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IDEALM: Efficient Data Reduction Method with Locally Exchangeable Measures IB- 2013-133
APPLICATIONS OF TECHNOLOGY: Measurement collection mechanisms for network communications and routers System logs Statistical analysis, e.g., financial markets, energy use, social network media Modeling, e.g., environmental studies, nuclear fusion simulations Science and engineering experiments ADVANTAGES: Efficient data size reduction – 47-80% in tests, … [Read more...] about IDEALM: Efficient Data Reduction Method with Locally Exchangeable Measures IB- 2013-133
LABELIT – Software for Macromolecular Diffraction Data Processing CR-1960
APPLICATIONS OF TECHNOLOGY: Output from Berkeley Lab's LABELIT software program for rapid processing of x-ray diffraction images. Automatically index X-ray diffraction images Quickly summarize the diffraction quality Determine Laue symmetry from a partial dataset ADVANTAGES: Makes visual inspection of images unnecessary Better algorithms for spot … [Read more...] about LABELIT – Software for Macromolecular Diffraction Data Processing CR-1960
OpenMSI – Advanced Visualization, Analysis and Management of Mass Spectrometry Imaging Data via the Web 2013-004
APPLICATIONS OF TECHNOLOGY: For mass spectrometry imaging (MSI) data Web-based management and storage Visualiztion of hyper-dimensional contents Statistical analysis ADVANTAGES: Combines biotechnology expertise with high performance computing ABSTRACT: OpenMSI's goal is to make the most high-performance, advanced data management, model building, … [Read more...] about OpenMSI – Advanced Visualization, Analysis and Management of Mass Spectrometry Imaging Data via the Web 2013-004
Visualization and Alignment Software for Comparative Genomics CR-1690
APPLICATION OF TECHNOLOGY: Comparative genomics ABSTRACT: VISualization Tool for Alignments is a program to depict long sequence alignments of DNA from two or more organisms with various types of annotation in a clear and easily interpretable format. Originally it was developed to locate conserved sequences in syntenic regions. Key Features: Clean graphical … [Read more...] about Visualization and Alignment Software for Comparative Genomics CR-1690